This question has been asked many times in different ways...
1st what does your contract require?
2cd assuming that guidance or contractual obligation has not been given I would state to the owner that ordinarily rotating equipment is not designed to run safely through an earthquake till it can be shut down. In Section II terms "SSE" Safe Shutdown Earthquake.
Do a search on this forum and you will find a lot on this subject matter.
There is a great deal of difference between designing a system to meet code stresses versus meeting allowable equipment loads for these occasional loads.
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Best Regards,
John C. Luf