Correct, WRC is for perpendicular cylinder-cylinder intersections.
The nozzle/equipment limit checks won't help you here. This is a 1st pass screening tool. If you exceed the defined limits, then you need to perform the more sophisticated analysis specific to your nozzle type.
If you're outside the scope/range of WRC, you'll need to utilize FEA.
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Regards,
Richard Ay - Consultant